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San Juan Aquatic Reserve Site Proposal Application
Site Proponent
San Juan County Marine Resources Committee (lead)
135 Rhone St
Friday Harbor, WA 98250
(360) 370-7592
Primary contact: Mary Knackstedt, maryk@co.san-juan.wa.us
Other Proponents: San Juan County Land Bank, San Juan County Parks Department, San Juan Lead Entity for Salmon Recovery, NOAA, National Park Service, Washington State Parks, People for Puget Sound, University of Washington Friday Harbor Labs, Friends of the San Juans, The Nature Conservancy, and The Whale Museum.
General Site Information
A. Site location:
The proposed site is located in San Juan County situated in northern Puget Sound. The county is comprised of four large islands and over 172 smaller islands located in the northwest portion of Washington State and within the larger context of the San Juan Archipelago.
The proposed site includes two sections shown on the figure as Proposed West and Proposed Central (Figure 1). Proposed West encompasses about 150,923 acres and includes the southern portion of Lopez Island, the western and northeastern shorelines of San Juan Island, the entirety of Stuart and Waldron Islands, and the northwestern coastline of Orcas Island. Proposed Central encompasses about 12,464 acres and includes the northeastern portion of San Juan Island down to the northern border of Friday Harbor, the north and west coastlines of Shaw Island, and West Sound of Orcas Island (excluding Deer Harbor).


Figure 1. Proposed aquatic reserve site boundaries
B. Site Overview:
1. General site description
The site includes state-owned tidelands and bedlands, DNR-designated sensitive marine habitat (e.g., kelp, eelgrass, forage fish spawning habitat), and other protected areas in the region (Figure 1). These areas include marine preserves, bottomfish recovery areas, state-owned lands and parks, portions of the San Juan Islands National Wildlife Refuge, the Sea Cucumber and Sea Urchin Commercial Harvest Exclusion Zones, the San Juan Island National Historical Park (English Camp and American Camp), San Juan County marine parks, The Nature Conservancy preserves, and six of the county’s priority watersheds as named in the San Juan County Watershed Management Action Plan. In addition, the proposed site is located within the larger context of the county’s Marine Stewardship Area (MSA). San Juan County designated the entire county as a voluntary MSA in 2004 and adopted a management plan for its protection in July 2007. The MSA Management Plan was developed by local and regional scientists, resource managers, and stakeholders to identify key marine resources, threats to ecosystem health, and strategies to address these threats.
The San Juan Islands contain a wide diversity of habitats and species, hosts scientific research, and serves as a vacation destination for domestic and international tourists. The proposed site includes habitats and species identified by the MSA Management Plan as biodiversity-related targets: rocky intertidal communities; rocky subtidal communities; nearshore sand, mud, and gravel communities; rockfish, lingcod, and greenling; seabirds; marine mammals; and Pacific salmon (Evans and Kennedy 2007). The targets align closely with DNR’s priority habitats and species listed in the Aquatic Reserve Guidance Document (Appendices C-F). (A more extensive list of habitats and species found in the region is included in Appendix A.)
Six of the priority watersheds identified in the San Juan County Watershed Management Action Plan are located in the proposed Aquatic Reserve site, including Friday Harbor (San Juan Island), Westcott/Garrison Bays (San Juan Island), Roche Harbor (San Juan Island), Mud/Hunter Bays and Lopez Sound (Lopez Island), West Sound (Orcas Island), and False Bay (San Juan Island) (San Juan County 2000) (Figure 2).

Figure 2. Priority Watersheds in San Juan County (San Juan County 2000)
The plan identified some unique characteristics of these six watersheds (Table X).
Table 1. Habitat and Species by Priority Watershed (San Juan County 2000)
|
Name |
Watershed Acreage |
Habitat/Species |
|
|
Upland Freshwater |
Marine and Intertidal |
||
|
Friday Harbor |
398 |
35 |
11% of watershed is wetlands River otter habitat, eelgrass beds in southeast part of the harbor, Bald eagle nests |
|
Westcott/Garrison Bays |
106 |
153 |
Large kelp and eelgrass beds (critical habitat for herring) Primary shellfish harvest areas (mussels, clams, oysters) on the island |
|
Roche Harbor |
3.5 |
43 |
Kelp and eelgrass beds used by herring, migratory waterfowl and eagle habitat |
|
Mud/Hunter Bays and Lopez Sound |
161 |
470 |
Freshwater wetlands, salt marshes, mudflats, eelgrass beds Bald eagle, great blue heron, kingfisher, killdeer, migratory and wintering shorebirds and waterfowl, herring, crabs, hardshell clams, shrimp |
|
West Sound |
254 |
292 |
Eelgrass beds Critical habitat for Pacific herring, river otter, many migratory waterfowl species West side of West Sound – Bald eagle nesting area |
|
False Bay |
743 |
232 |
Tidal flats, eelgrass and kelp beds Many intertidal species normally found on the open coast (Giant Green Anemones, Gooseneck Barnacles, and California Mussels) |
2. Boundaries description (include section, range and township, county)
Tables 2 and 3 display the specific boundaries of the proposed reserve site in San Juan County as shown in Figure 1.
Table 2. Boundary Description of West Area of Proposed Site (including portions of Lopez, San Juan, Stuart, Waldron, and Orcas Islands)
|
TOWNSHIP |
SECTION |
|
|
1 |
34 |
4-9, 15-21 |
|
1 |
35 |
31,33 |
|
2 |
34 |
4-11, 13-16, 23-25 |
|
2 |
37 |
6-7, 9-10, 15-16, 18, 20-21, 29-31 |
|
3 |
34 |
1,3,4,10-12 |
|
3 |
35 |
30-34 |
|
3 |
36 |
1,4-7,12,17-20 |
|
3 |
37 |
1, 11-15, 23-24, 36 |
|
4 |
35 |
2-3, 11, 14, 23-25 |
|
4 |
36 |
1-2, 6, 11-16, 21-28, 34-36 |
|
4 |
37 |
20-22, 25-29, 33-36 |
Table 3. Boundary Description of Central Area of Proposed Site (including portions of San Juan, Shaw, and Orcas Islands)
|
TOWNSHIP |
SECTION |
|
|
2 |
35 |
5 |
|
2 |
36 |
4-9, 16-22, 27-28, 30, 32 |
|
3 |
34 |
24 |
|
3 |
35 |
1-3, 11-12 |
|
3 |
36 |
1, 11-14, 19-20, 23-25, 27-29, 34 |
3. Current ownership of privately and publicly owned (other than DNR) aquatic lands adjacent to the proposed site.
Of San Juan County’s 375 miles of tidelands, about 78% are state-owned. In the reserve site, landowners and managers include the Bureau of Land Management, U.S. Fish and Wildlife Service, National Park Service, The Nature Conservancy, San Juan County Parks, State Parks, University of Washington Friday Harbor Labs, Washington Department of Fish and Wildlife, San Juan County Land Bank, San Juan Preservation Trust, and the San Juan MRC (Table 4). Details and maps of these areas are located in Appendix B.
Table 4. Managers/Landowners in Proposed Site
|
Manager/Landowner |
Site(s) |
Details |
|
Bureau of Land Management |
Turn Point (Stuart Island); Point Colville, Watmough Bay, and Iceberg Point (south Lopez Island) |
Public lands for recreation and education |
|
U.S. Fish and Wildlife Service (USFWS) |
San Juan Islands National Wildlife Refuge |
83 islands, rocks, and reefs; breeding and foraging habitat for marine mammals and birds; no harvest restrictions |
|
National Park Service (NPS) |
San Juan Island National Historical Park: English Camp and American Camp |
English Camp (529 acres): located on Garrison Bay, 1400 feet of shoreline American Camp (1223 acres): situated between Griffin Bay and Haro Strait Recently released draft management plan for SAJH; preferred alternative would preserve the natural, historic, and cultural resources of both sites, and also introduce new facilities, trails, and educational programs for visitors (NPS 2008) |
|
The Nature Conservancy |
Goose, Deadman, Sentinel, and Yellow Islands |
No regulatory authority, provides some shoreline/tideland protection |
|
San Juan County Parks |
San Juan County Park, Reuben Tarte Park, Eagle Cove |
Public recreation sites |
|
State Parks |
Lime Kiln Point; Stuart, Posey, Jones, Turn Islands; Griffin Bay
|
Lime Kiln Point: 36 acres, land-based whale watching site, lighthouse used for interpretation and orca research Stuart Island: 85 acres, 33,030 feet of shoreline Posey Island: 1 acre, 1,000 feet of shoreline Jones Island: 188 acres, 25,000 feet of shoreline Turn Island: 35 acres, 16,000 feet of shoreline Griffin Bay: 15 acres, 340 feet of shoreline Except for Lime Kiln Point, all parks accessible only by boat |
|
University of Washington Friday Harbor Labs |
Owned: FHL, False Bay, Parks Bay, Parks Bay and Point George Leased: Garrison Bay, FHL at Point Caution, Goose Island, Deadman Island, Iceberg Point, Point Colville |
Promotes and hosts scientific research |
|
Washington Department of Fish and Wildlife (WDFW) |
Intertidal and subtidal areas of San Juan and Upright Channel and Haro Strait exclusion zones |
Special management areas established by WDFW to prohibit non-tribal commercial fishing of sea urchins and sea cucumbers |
|
UW FHL/WDFW |
Yellow and Low Islands, Friday Harbor, Shaw Island, False Bay |
Marine preserves established to help support scientific research and to preserve biodiversity; some harvest restrictions Yellow and Low Islands: 1.54 acres intertidal, 185.65 acres subtidal Friday Harbor: 0.70 acres intertidal, 424.83 acres subtidal; uplands owned by FHL Shaw Island: 0.54 acres intertidal, 453.31 acres subtidal False Bay: 225.19 acres intertidal, 80.53 acres subtidal |
|
San Juan County Land Bank |
San Juan Island – Edwards Point, Hunt, Deadman Bay Preserve, West Side Scenic Preserve, Third Lagoon Preserve Henry Island – Mosquito Pass Preserve Crane Island – Pole Pass Waldron Island – Point Disney Preserve Lopez Island – Johnson, Helwig, Cole, Watmough Bay Preserve Orcas Island – Clapp, Orcas Village Tidelands |
Conservation easements and fee-simple acquisitions |
|
San Juan Preservation Trust |
San Juan Island – Pile Point Henry Island – Hull, Mosquito Pass Preserve Stuart Island – Skartvedt-Burget, Harmony Preserve Waldron Island – Cook Family, Point Hammond, Disney Mountain Preserve Lopez Island – Hoedemaker, Iceberg Peninsula, Watmough, Whale Rocks |
Conservation easements and fee-simple acquisitions |
|
San Juan County MRC |
Bottomfish Recovery Zones: Bell Island, Charles Island, Pile Point, Lime Kiln Lighthouse, Kellett Bluff, Gull Rock, Bare Island |
Established to help replenish depleted stocks; voluntary protection, on-the-water education used to inform the public. Seven of the eight zones are located within the proposed site. |
4. Current county shoreline designation and description
Under the San Juan County Municipal Code 18.50.110, the areas seaward from the line of extreme low tide are designated shorelines of statewide significance, and therefore, their use and development is subject to compliance with the San Juan County Comprehensive Plan. The plan delineates three districts. District 1 includes San Juan, Henry, Spieden, Stuart, Johns, and several smaller islands. District 2 includes Orcas, Waldron, and smaller islands. District 3 encompasses Lopez, Shaw, and other smaller islands. The proposed reserve site includes sections of all three districts. Land use designations within the proposed site include Rural Residential, Rural Farm Forest, Natural, Conservancy, Agricultural, and Forest Resource. These designations are defined as follows (San Juan County 2002):
Table 5 displays the three districts’ shoreline designations. The official maps of the three districts are in Appendix C.
Table 5. Shoreline Designation by Island
|
|
Rural Residential |
Rural Farm Forest |
Natural |
Conservancy |
Agricultural |
Forest Resource |
|
District 1 |
|
|
|
|
|
|
|
San Juan |
X |
X |
X |
X |
X |
|
|
Henry |
X |
X |
X |
|
|
|
|
Spieden |
|
|
|
X |
|
|
|
Stuart |
X |
X |
X |
X |
|
|
|
Johns |
X |
X |
|
|
|
|
|
Pearl |
X |
|
|
|
|
|
|
Satellite |
|
|
|
X |
|
|
|
Smaller Islands* |
|
|
X |
|
|
|
|
District 2 |
|
|
|
|
|
|
|
Orcas |
X |
X |
X |
X |
X |
X |
|
Waldron |
X |
X |
X |
X |
|
|
|
Skipjack |
|
|
X |
|
|
|
|
Jones |
|
|
X |
|
|
|
|
Crane |
X |
|
X |
|
|
|
|
Smaller Islands* |
|
|
X (Yellow, Low, Victim, Skull) |
X (all others) |
|
|
|
District 3 |
|
|
|
|
|
|
|
Shaw |
X |
X |
X |
X |
|
X |
|
Lopez |
X |
X |
X |
X |
X |
X |
|
Blind |
|
|
X |
|
|
|
|
Smaller Islands* |
|
|
X (all others) |
X (Long and Charles) |
|
|
*Smaller islands in District 1 include Cemetary, Ripple, Cactus, Sentinel, Flattop, Battleship, Barren, Goose, Posey, and O’Neal.
*Smaller islands in District 2 include Yellow, Low, Victim, Skull, Reef, McConnell, Coon, Cliff, Bell, Little Double, Big Double, and Picnic.
*Smaller islands in District 3 include Deadman, Buck, Mummy, Secar, Hall, Iceberg, Fortress, Boulder, Castle, Colville, Long, and Charles.
C. Justification for proposal: (briefly summarize the reason for establishing the aquatic reserve based on the criteria discussed in Section 6 and Appendices C, D, E, and F)
The purpose for establishing this region as an Aquatic Reserve is to protect the natural environment and unique culture of the San Juan Islands, support ecosystem connectivity with other protected aquatic and upland areas, and to provide scientific and educational public benefits. There is minimal upland development in much of the proposed site and relatively low shoreline modification in the county as a whole. The San Juan Islands contain biologically diverse populations of fish, marine mammals, invertebrates, and plants. The proposed site includes habitats and species identified by the MSA Manag